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1

Logical Analysis of the Talmudic Rules of General and Specific (Klalim-u-Pratim)

Abraham, Michael, Gabbay, Dov M., Hazut, Gabriel, Maruvka, Yosef E., Schild, Uri

Journal:

History and Philosophy of Logic

Year:

2011

Language:

english

File:

PDF, 336 KB

english, 2011

2

Tumor cells can follow distinct evolutionary paths to become resistant to epidermal growth factor receptor inhibition

Hata, Aaron N, Niederst, Matthew J, Archibald, Hannah L, Gomez-Caraballo, Maria, Siddiqui, Faria M, Mulvey, Hillary E, Maruvka, Yosef E, Ji, Fei, Bhang, Hyo-eun C, Krishnamurthy Radhakrishna, Viveksag

Journal:

Nature Medicine

Year:

2016

Language:

english

File:

PDF, 1.45 MB

english, 2016

3

The Genomic and Immune Landscapes of Lethal Metastatic Breast Cancer

De Mattos-Arruda, Leticia, Sammut, Stephen-John, Ross, Edith M., Bashford-Rogers, Rachael, Greenstein, Erez, Markus, Havell, Morganella, Sandro, Teng, Yvonne, Maruvka, Yosef, Pereira, Bernard, Rueda,

Journal:

Year:

2019

Language:

english

File:

PDF, 7.48 MB

english, 2019

4

Analysis of somatic microsatellite indels identifies driver events in human tumors

Maruvka, Yosef E, Mouw, Kent W, Karlic, Rosa, Parasuraman, Prasanna, Kamburov, Atanas, Polak, Paz, Haradhvala, Nicholas J, Hess, Julian M, Rheinbay, Esther, Brody, Yehuda, Koren, Amnon, Braunstein, Li

Journal:

Nature Biotechnology

Year:

2017

Language:

english

File:

PDF, 1.31 MB

english, 2017

5

Slicing and Dicing the Genome: A

Yosef E. Maruvka, Nadav M. Shnerb, Sorin Solomon, Gur Yaari, David A. Kessler

Journal:

Journal of Statistical Physics

Year:

2011

Language:

english

File:

PDF, 701 KB

english, 2011

6

Neutral Dynamics and Cluster Statistics in a Tropical Forest.

Efrat Seri, Yosef E. Maruvka, and Nadav M. Shnerb

Journal:

American Naturalist

Year:

2012

Language:

english

File:

PDF, 2.67 MB

english, 2012

7

First principles theories for last name dynamics

Maruvka, Yosef E., Shnerb, Nadav M.

Journal:

Physics of Life Reviews

Year:

2013

Language:

english

File:

PDF, 75 KB

english, 2013

8

Nonlocal competition and logistic growth: Patterns, defects, and fronts

Maruvka, Yosef E., Shnerb, Nadav M.

Journal:

Physical Review E

Year:

2006

Language:

english

File:

PDF, 508 KB

english, 2006

9

Nonlocal competition and the speciation transition on random networks

Maruvka, Yosef E., Kalisky, Tomer, Shnerb, Nadav M.

Journal:

Physical Review E

Year:

2008

Language:

english

File:

PDF, 154 KB

english, 2008

10

Nonlocal competition and front propagation in branching-coalescence systems

Maruvka, Yosef E., Shnerb, Nadav M.

Journal:

Physical Review E

Year:

2007

Language:

english

File:

PDF, 149 KB

english, 2007

11

Polyploidy can drive rapid adaptation in yeast

Selmecki, Anna M., Maruvka, Yosef E., Richmond, Phillip A., Guillet, Marie, Shoresh, Noam, Sorenson, Amber L., De, Subhajyoti, Kishony, Roy, Michor, Franziska, Dowell, Robin, Pellman, David

Journal:

Year:

2015

Language:

english

File:

PDF, 4.09 MB

english, 2015

12

Comparing Algorithms That Reconstruct Cell Lineage Trees Utilizing Information on Microsatellite Mutations

Chapal-Ilani, Noa, Maruvka, Yosef E., Spiro, Adam, Reizel, Yitzhak, Adar, Rivka, Shlush, Liran I., Shapiro, Ehud, Wasserman, Wyeth W.

Journal:

PLoS Computational Biology

Year:

2013

Language:

english

File:

PDF, 1.25 MB

english, 2013

13

Polymorphism Data Can Reveal the Origin of Species Abundance Statistics

Maruvka, Yosef E., Shnerb, Nadav M., Bergstrom, Carl T.

Journal:

PLoS Computational Biology

Year:

2009

Language:

english

File:

PDF, 205 KB

english, 2009

14

Cell Lineage Analysis of the Mammalian Female Germline

Reizel, Yitzhak, Itzkovitz, Shalev, Adar, Rivka, Elbaz, Judith, Jinich, Adrian, Chapal-Ilani, Noa, Maruvka, Yosef E., Nevo, Nava, Marx, Zipora, Horovitz, Inna, Wasserstrom, Adam, Mayo, Avi, Shur, Iren

Journal:

Year:

2012

Language:

english

File:

PDF, 717 KB

english, 2012

15

Colon Stem Cell and Crypt Dynamics Exposed by Cell Lineage Reconstruction

Reizel, Yitzhak, Chapal-Ilani, Noa, Adar, Rivka, Itzkovitz, Shalev, Elbaz, Judith, Maruvka, Yosef E., Segev, Elad, Shlush, Liran I., Dekel, Nava, Shapiro, Ehud, Horwitz, Marshall S.

Journal:

Year:

2011

Language:

english

File:

PDF, 1.03 MB

english, 2011

16

Mutational Strand Asymmetries in Cancer Genomes Reveal Mechanisms of DNA Damage and Repair

Haradhvala, Nicholas J., Polak, Paz, Stojanov, Petar, Covington, Kyle R., Shinbrot, Eve, Hess, Julian M., Rheinbay, Esther, Kim, Jaegil, Maruvka, Yosef E., Braunstein, Lior Z., Kamburov, Atanas, Hanaw

Journal:

Year:

2016

Language:

english

File:

PDF, 2.21 MB

english, 2016

17

A mutational signature reveals alterations underlying deficient homologous recombination repair in breast cancer

Polak, Paz, Kim, Jaegil, Braunstein, Lior Z, Karlic, Rosa, Haradhavala, Nicholas J, Tiao, Grace, Rosebrock, Daniel, Livitz, Dimitri, Kübler, Kirsten, Mouw, Kent W, Kamburov, Atanas, Maruvka, Yosef E,

Journal:

Nature Genetics

Year:

2017

Language:

english

File:

PDF, 16.44 MB

english, 2017

18

On the Validity of Using Increases in 5-Year Survival Rates to Measure Success in the Fight against Cancer

Maruvka, Yosef E., Tang, Min, Michor, Franziska, Xia, Yinglin

Journal:

Year:

2014

Language:

english

File:

PDF, 316 KB

english, 2014

19

The Birth-Death-Mutation Process: A New Paradigm for Fat Tailed Distributions

Maruvka, Yosef E., Kessler, David A., Shnerb, Nadav M., Ben-Jacob, Eshel

Journal:

Year:

2011

Language:

english

File:

PDF, 270 KB

english, 2011

20

Quantification of somatic mutation flow across individual cell division events by lineage sequencing

Brody, Yehuda, Kimmerling, Robert J., Maruvka, Yosef E., Benjamin, David, Elacqua, Joshua J., Haradhvala, Nicholas J., Kim, Jaegil, Mouw, Kent W., Frangaj, Kristjana, Koren, Amnon, Getz, Gad, Manalis,

Journal:

Genome Research

Year:

2018

Language:

english

File:

PDF, 4.14 MB

english, 2018

21

Analyzing Frequently Mutated Genes and the Association With Tumor Mutation Load

Maruvka, Yosef E., Haradhvala, Nicholas J., Getz, Gad

Journal:

Year:

2019

Language:

english

File:

PDF, 44 KB

english, 2019

22

Patient-specific tumor growth trajectories determine persistent and resistant cancer cell populations during treatment with targeted therapies

Grassberger, Clemens, McClatchy, David M, Geng, Changran, Kamran, Sophia C, Fintelmann, Florian, Maruvka, Yosef E, Piotrowska, Zofia, Willers, Henning, Sequist, Lecia V., Hata, Aaron N., Paganetti, Ha

Journal:

Cancer Research

Year:

2019

Language:

english

File:

PDF, 4.51 MB

english, 2019

23

A validated lineage-derived somatic truth data set enables benchmarking in cancer genome analysis

Shand, Megan, Soto, Jose, Lichtenstein, Lee, Benjamin, David, Farjoun, Yossi, Brody, Yehuda, Maruvka, Yosef, Blainey, Paul C., Banks, Eric

Journal:

Communications Biology

Year:

2020

File:

PDF, 1.96 MB

2020